First, I agree with the previous advice of go with what looks and feels best to you. IMO, your pickups and amp will have a lot more influence on your sound then the fretboard.
Personally, I prefer rosewood and ebony fretboards. Mainly because I don't like the "feel" of a maple fretboard. I know that's really subjective but I think that's what finding the right guitar is all about - what feels right to the one playing it.
Good luck and have fun shopping for that perfect fit.